scRNA-seq Analysis Report Outline
[Experiment Title]
Principal Investigator: --
Report Date: --
PRELIMINARY REPORT
1. Abstract & Objective
[Abstract will appear here...]
2. Quality Control (QC) Metrics
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3. UMAP Visualization & Cell Clusters
Dimensionality reduction identified 0 distinct clusters based on gene expression profiles.
Define clusters in Tab 3 to generate UMAP plot...
4. Top Marker Genes by Cluster
| Cluster | Top Marker Genes |
|---|
5. Biological Interpretation
[Conclusion will appear here...]
Project Setup
Quality Control Metrics
Cluster Identification
Define the cell clusters identified from your analysis. This will update the UMAP plot and the Marker Genes tab.
Markers & Interpretation
List the top marker genes that define each cluster. Use comma-separated values.
Define clusters in Tab 3 first...
Configuration
Load sample data to preview the tool.